Package: qra 0.2.8

qra: Quantal Response Analysis for Dose-Mortality Data

Functions are provided that implement the use of the Fieller's formula methodology, for calculating a confidence interval for a ratio of (commonly, correlated) means. See Fieller (1954) <doi:10.1111/j.2517-6161.1954.tb00159.x>. Here, the application of primary interest is to studies of insect mortality response to increasing doses of a fumigant, or, e.g., to time in coolstorage. The formula is used to calculate a confidence interval for the dose or time required to achieve a specified mortality proportion, commonly 0.5 or 0.99. Vignettes demonstrate link functions that may be considered, checks on fitted models, and alternative choices of error family. Note in particular the betabinomial error family. See also Maindonald, Waddell, and Petry (2001) <doi:10.1016/S0925-5214(01)00082-5>.

Authors:John Maindonald [aut, cre]

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NEWS

# Install 'qra' in R:
install.packages('qra', repos = c('https://jhmaindonald.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/jhmaindonald/qra/issues

Datasets:
  • HawCon - Hawaiian Contemporary Cold Treatment Dataset
  • codling1988 - Dose-mortality data, for fumigation of codling moth with methyl bromide
  • codling1989 - Dose-mortality data, for fumigation of codling moth with methyl bromide
  • kerrich - Kerrich Coin Toss Trial Outcomes
  • malesINfirst12 - Number of males among first 12 in families of 13 children
  • rayBlight - Incidence of ray blight disease of pyrethrum

On CRAN:

13 exports 0.84 score 60 dependencies 1 scripts 246 downloads

Last updated 10 months agofrom:c13477efaa. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 06 2024
R-4.5-winOKSep 06 2024
R-4.5-linuxOKSep 06 2024
R-4.4-winOKSep 06 2024
R-4.4-macOKSep 06 2024
R-4.3-winOKSep 06 2024
R-4.3-macOKSep 06 2024

Exports:checkDispextractLTextractLTpwrfiellerfieller2foldpfpowergetRhogetScaleCoefgpsWithingraphSumscaleLocAdjustvarRatio

Dependencies:base64encbootbslibcachemclicolorspacedeldirdigestevaluatefansifarverfastmapfontawesomefsggplot2gluegtablehighrhtmltoolsinterpisobandjpegjquerylibjsonliteknitrlabelinglatticelatticeExtralifecyclelme4magrittrMASSMatrixmemoisemgcvmimeminqamunsellnlmenloptrpillarpkgconfigpngR6rappdirsRColorBrewerRcppRcppEigenrlangrmarkdownsassscalestibbletinytexutf8vctrsviridisLitewithrxfunyaml

Distributions for Binomial-like and Poisson-like Counts

Rendered fromcountDists.Rmdusingknitr::rmarkdownon Sep 06 2024.

Last update: 2023-11-10
Started: 2021-05-05

Plot MeBr Apple Fumigation Data

Rendered fromMeBrPlot.Rmdusingknitr::rmarkdownon Sep 06 2024.

Last update: 2023-11-10
Started: 2017-08-08

Quantal Response Analysis Functions

Rendered fromtimeMortality.Rmdusingknitr::rmarkdownon Sep 06 2024.

Last update: 2021-10-29
Started: 2021-05-05