Package: hwde 0.67-3
hwde: Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci
Fits models for genotypic disequilibria, as described in Huttley and Wilson (2000) <doi:10.1093/genetics/156.4.2127>, Weir (1996) and Weir and Wilson (1986). Contrast terms are available that account for first order interactions between loci. Also implements, for a single locus in a single population, a conditional exact test for Hardy-Weinberg equilibrium.
Authors:
hwde_0.67-3.tar.gz
hwde_0.67-3.zip(r-4.7)hwde_0.67-3.zip(r-4.6)hwde_0.67-3.zip(r-4.5)
hwde_0.67-3.tgz(r-4.6-any)hwde_0.67-3.tgz(r-4.5-any)
hwde_0.67-3.tar.gz(r-4.7-any)hwde_0.67-3.tar.gz(r-4.6-any)
hwde_0.67-3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hwde/json (API)
| # Install 'hwde' in R: |
| install.packages('hwde', repos = c('https://jhmaindonald.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jhmaindonald/hwde/issues
Datasets:
- IndianIrish - Observed genotype frequencies at MN and S loci, for 2 populations
- mendelABC - Mendel's F2 trifactorial data for seed shape
Last updated from:d655ddf5fe. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 103 | ||
| source / vignettes | OK | 143 | ||
| linux-release-x86_64 | NOTE | 153 | ||
| macos-release-arm64 | NOTE | 107 | ||
| macos-oldrel-arm64 | NOTE | 108 | ||
| windows-devel | NOTE | 68 | ||
| windows-release | NOTE | 65 | ||
| windows-oldrel | NOTE | 73 | ||
| wasm-release | OK | 84 |
Exports:decode.genotypeshwdehwexactmake.contrasts
Dependencies:
